segmentation fault--running small test case, compiled with gfortran

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Forum >> NWChem's corner >> Compiling NWChem >> segmentation fault--running small test case, compiled with gfortran

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Gets Around
Threads 13
Posts 99
5:26:50 PM PDT - Sat, May 12th 2012
I'm having the same problem. Compilation works flawlessly on a ROCKS5.4.3 system (GNU Fortran (GCC) 4.1.2 20080704 (Red Hat 4.1.2-50)) but yields segfaulting binaries (same error as shown in posts above) on debian testing (GNU Fortran (Debian 4.6.3-1) 4.6.3). An added twist is that 32 bit binaries built on 32 bit debian testing work fine.

A bit more detail:
0:Segmentation Violation error, status=: 11
(rank:0 hostname:tantalum pid:19676):ARMCI DASSERT fail. ../../ga-5-1/armci/src/common/signaltrap.c:SigSegvHandler():310 cond:0
application called MPI_Abort(comm=0x84000001, 11) - process 0
      • glibc detected *** nwchem: corrupted double-linked list: 0x000000010ac34880 ***
= Backtrace: ===
/lib/x86_64-linux-gnu/libc.so.6(+0x75ab6)[0x7f597b129ab6]
/lib/x86_64-linux-gnu/libc.so.6(+0x7754c)[0x7f597b12b54c]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x6c)[0x7f597b12e7ec]
/usr/lib/x86_64-linux-gnu/libgfortran.so.3(+0xcc811)[0x7f597bbd5811]
/usr/lib/x86_64-linux-gnu/libgfortran.so.3(+0xdba7f)[0x7f597bbe4a7f]
/usr/lib/x86_64-linux-gnu/libgfortran.so.3(+0xdbbaa)[0x7f597bbe4baa]
/usr/lib/x86_64-linux-gnu/libgfortran.so.3(+0x1ab09)[0x7f597bb23b09]
/lib64/ld-linux-x86-64.so.2(+0xe21c)[0x7f597c42421c]
/lib/x86_64-linux-gnu/libc.so.6(+0x36df2)[0x7f597b0eadf2]
/lib/x86_64-linux-gnu/libc.so.6(+0x36e45)[0x7f597b0eae45]
Edited On 6:07:04 PM PDT - Sat, May 12th 2012 by Ohlincha


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